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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
907
ChIP-seq
367
total RNA-seq
230
ATAC-seq
180
single cell RNA-seq
56
snATAC-seq
48
WGBS
31
DNase-seq
25
pCHi-C
13
Hi-C
8
RRBS
5
GRO-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
2
small RNA-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
FAIRE-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
0
snDrop-seq
Assay category
1
Transcription
Date released
4
August, 2021
1
March, 2023
Organism
4
Homo sapiens
Biosample type
4
cell line
tissue
1
stem cell
Organ
2
kidney
2
liver
Project
4
AMP
1
community
Lab
4
Bing Ren, UCSD
1
Anna Gloyn, Oxford
Audit category:
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inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
5 results
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STARR-seq
CRISPR RNA-seq
cell line
HEK293T
2
HepG2
2
stem cell
SB Ad3.1
1