Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1656
ChIP-seq
1254
total RNA-seq
417
ATAC-seq
193
DNase-seq
158
single cell RNA-seq
86
RNA microarray
40
pCHi-C
28
WGBS
25
Hi-C
18
small RNA-seq
15
RRBS
8
snATAC-seq
5
GRO-seq
5
STARR-seq
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
2
Capture-C
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Assay category
15
DNA methylation
Date released
9
July, 2019
6
August, 2017
5
August, 2021
Available data
13
bed bedMethyl
13
bigBed bedMethyl
4
fastq
Organism
20
Homo sapiens
Biosample type
11
tissue
5
cell line
4
primary cell
Organ
epithelium
6
kidney
5
musculature of body
4
liver
2
brain
2
heart
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
20
AMP
Genome assembly (visualization)
13
hg19
Lab
15
AMP-T2D consortium
5
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
assay_title!
CRISPR genome editing followed by sgRNA sequencing
organ_slims!
epithelium
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
RRBS
STARR-seq
tissue
skeletal muscle tissue
4
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
cell line
HEK293T
2
HepG2
2
Synthesized DNA
1
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
skeletal muscle cell
1
skeletal muscle myoblast
1
See all biosamples
Download