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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1743
ChIP-seq
1336
total RNA-seq
471
ATAC-seq
222
single cell RNA-seq
212
DNase-seq
87
RNA microarray
40
pCHi-C
30
Hi-C
28
WGBS
21
RRBS
18
small RNA-seq
10
MeRIP-seq
8
snATAC-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
snDrop-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Date released
5
August, 2021
5
January, 2018
1
October, 2022
Available data
5
bigWig
5
fastq
1
txt
Organism
10
Homo sapiens
Biosample type
6
cell line
4
in vitro differentiated cells
1
stem cell
Organ
2
kidney
2
liver
1
embryo
Project
11
AMP
Genome assembly (visualization)
5
hg18
Lab
6
AMP-T2D consortium
5
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
11 results
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Clear Filters
GRO-seq
STARR-seq
MPRA
cell line
HEK293T
2
HepG2
2
MIN6
1
Synthesized DNA
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
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