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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1735
ChIP-seq
791
total RNA-seq
449
ATAC-seq
216
single cell RNA-seq
212
DNase-seq
38
pCHi-C
30
Hi-C
28
WGBS
21
RRBS
18
small RNA-seq
10
MeRIP-seq
8
snATAC-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
RNA microarray
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Date released
February, 2021
6
August, 2021
2
December, 2019
Available data
2
tsv
Organism
7
Homo sapiens
Biosample type
5
cell line
3
tissue
Organ
4
kidney
2
liver
1
adipose tissue
1
connective tissue
1
epithelium
Project
8
AMP
Lab
5
Bing Ren, UCSD
3
AMP-T2D consortium
Audit category:
2
audit script error
1
inconsistent ontology term
month_released!
February, 2021
BIOSAMPLE
ASSAY
8 results
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STARR-seq
RNA microarray
cell line
HEK293T
2
HepG2
2
Synthesized DNA
1
tissue
kidney interstitium
1
renal glomerulus
1
subcutaneous adipose tissue
1
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