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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1467
ChIP-seq
934
total RNA-seq
333
ATAC-seq
193
DNase-seq
142
single cell RNA-seq
87
RNA microarray
38
pCHi-C
22
WGBS
19
Hi-C
18
RRBS
16
small RNA-seq
7
snATAC-seq
5
GRO-seq
5
STARR-seq
3
snDrop-seq
2
Capture-C
2
FAIRE-seq
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Assay category
22
DNA methylation
Date released
10
July, 2019
9
August, 2017
5
August, 2021
3
November, 2018
Available data
12
bam
12
bed bedMethyl
12
bigBed bedMethyl
12
bigWig
7
fastq
Organism
27
Homo sapiens
Biosample type
21
tissue
6
cell line
Organ
8
heart
7
liver
6
adipose tissue
6
connective tissue
pancreas
2
blood vessel
2
kidney
2
spleen
vasculature
1
limb
1
musculature of body
Project
27
AMP
Genome assembly (visualization)
12
GRCh38
Lab
22
AMP-T2D consortium
5
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
vasculature
pancreas
BIOSAMPLE
ASSAY
27 results
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WGBS
STARR-seq
tissue
heart left ventricle
4
adipose tissue
3
liver
3
subcutaneous abdominal adipose tissue
3
heart right ventricle
2
+ See 5 more…
cell line
HepG2
1
2
HEK293T
2
Synthesized DNA
1
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