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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
482
ChIP-seq
111
total RNA-seq
29
ATAC-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
4
Hi-C
2
Capture-C
2
DNase-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
WGBS
1
whole genome sequencing assay
Assay category
111
Transcription
Date released
78
February, 2021
22
August, 2021
5
January, 2019
4
May, 2021
4
October, 2019
2
March, 2020
1
November, 2019
Available data
111
tsv
102
bam
102
bigWig
5
fastq
Organism
116
Homo sapiens
Biosample type
1030
tissue
136
in vitro differentiated cells
116
cell line
59
primary cell
Organ
52
artery
52
blood vessel
52
heart
52
vasculature
32
epithelium
31
pancreas
16
liver
8
embryo
6
kidney
Project
116
AMP
2
T1D
Genome assembly (visualization)
102
GRCh38
102
hg19
Lab
102
AMP-T2D consortium
14
Bing Ren, UCSD
Audit category:
35
inconsistent ontology term
BIOSAMPLE
ASSAY
116 results
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total RNA-seq
STARR-seq
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
31
HepG2
14
2
H1-hESC
8
HEK293T
2
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