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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ATAC-seq
19
ChIP-seq
9
total RNA-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
9
Transcription
Date released
14
August, 2021
Available data
113
tsv
bam
104
bigWig
5
fastq
Organism
14
Homo sapiens
Biosample type
130
tissue
97
primary cell
14
cell line
9
in vitro differentiated cells
Organ
11
liver
2
kidney
Project
14
AMP
Lab
14
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
14 results
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total RNA-seq
STARR-seq
cell line
HepG2
9
2
HEK293T
2
Synthesized DNA
1
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