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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
484
ChIP-seq
113
total RNA-seq
29
ATAC-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
DNase-seq
2
HiChIP
1
WGBS
1
whole genome sequencing assay
Assay category
2
DNA accessibility
Date released
5
August, 2021
2
October, 2019
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
7
Homo sapiens
Biosample type
178
tissue
31
primary cell
7
cell line
1
in vitro differentiated cells
Organ
3
kidney
2
liver
1
epithelium
1
pancreas
Project
7
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
5
Bing Ren, UCSD
2
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
7 results
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STARR-seq
DNase-seq
cell line
HEK293T
2
HepG2
2
Panc1
1
Synthesized DNA
1
glomerular visceral epithelial cell
1
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