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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
138
ChIP-seq
19
ATAC-seq
9
total RNA-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
Hi-C
2
Capture-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
19
DNA accessibility
Date released
16
May, 2021
5
August, 2021
2
March, 2020
1
January, 2018
Available data
3
bigWig
1
tsv
Organism
24
Homo sapiens
Biosample type
151
primary cell
102
tissue
25
in vitro differentiated cells
24
cell line
Organ
18
epithelium
18
pancreas
2
kidney
2
liver
1
blood
1
bodily fluid
Project
24
AMP
Genome assembly (visualization)
13
hg19
GRCh38
Lab
19
AMP-T2D consortium
5
Bing Ren, UCSD
Audit category:
19
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
24 results
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ATAC-seq
STARR-seq
cell line
EndoC_BH1
18
HEK293T
2
HepG2
2
GM12878
1
Synthesized DNA
1
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