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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
466
ChIP-seq
96
total RNA-seq
29
ATAC-seq
6
MeRIP-seq
6
pCHi-C
3
CRISPR genome editing followed by DNA sequencing
3
Hi-C
2
DNase-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
0
STARR-seq
Assay category
96
Transcription
Date released
78
February, 2021
August, 2021
5
January, 2019
4
March, 2020
4
May, 2021
4
October, 2019
1
November, 2019
Available data
96
bam
96
bigWig
96
tsv
5
fastq
Organism
96
Homo sapiens
Biosample type
987
tissue
247
primary cell
129
in vitro differentiated cells
96
cell line
Organ
52
artery
52
blood vessel
52
heart
52
vasculature
34
epithelium
33
pancreas
5
liver
4
kidney
Project
94
AMP
2
T1D
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
96
AMP-T2D consortium
Audit category:
36
inconsistent ontology term
month_released!
August, 2021
BIOSAMPLE
ASSAY
96 results
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total RNA-seq
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
33
HepG2
5
early embryonic cell
2
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
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