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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
857
ChIP-seq
237
total RNA-seq
134
single cell RNA-seq
61
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
17
DNA methylation
Date released
7
November, 2018
6
February, 2021
5
January, 2018
4
August, 2017
Available data
41
zippedFastqFolder
22
bigWig
22
fastq
18
bam
17
bed bedMethyl
17
bigBed bedMethyl
6
tsv
Organism
22
Homo sapiens
Biosample type
10
tissue
6
primary cell
4
in vitro differentiated cells
1
cell line
1
stem cell
Organ
10
pancreas
6
epithelium
3
adipose tissue
3
connective tissue
2
liver
2
spleen
1
embryo
Project
16
AMP
6
HPAP
Genome assembly (visualization)
9
GRCh38
5
hg18
Lab
16
AMP-T2D consortium
6
Klaus Kaestner, Upenn
assay_title!
RNA microarray
BIOSAMPLE
ASSAY
22 results
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WGBS
GRO-seq
tissue
adipose tissue
3
body of pancreas
2
pancreas
2
spleen
2
liver
1
primary cell
pancreatic alpha cell
6
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
cell line
HepG2
1
stem cell
hESC
1
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