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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
197
total RNA-seq
141
single cell RNA-seq
88
ChIP-seq
76
snATAC-seq
60
ATAC-seq
47
WGBS
17
pCHi-C
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
47
DNA methylation
Date released
41
May, 2022
6
February, 2021
3
February, 2023
Available data
41
zippedFastqFolder
6
fastq
6
tsv
Organism
50
Homo sapiens
Biosample type
47
primary cell
3
cell line
Organ
47
epithelium
47
pancreas
Project
47
HPAP
AMP
3
T1D
Lab
47
Klaus Kaestner, Upenn
3
Kyle Gaulton, UCSD
award.project!
AMP
BIOSAMPLE
ASSAY
50 results
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WGBS
CRISPR genome editing followed by DNA sequencing
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cell line
EndoC_BH1
3
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