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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
484
ChIP-seq
113
total RNA-seq
29
ATAC-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
4
Hi-C
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
DNase-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA methylation
Date released
5
August, 2021
1
November, 2018
Available data
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
1
fastq
Organism
6
Homo sapiens
Biosample type
47
primary cell
27
tissue
6
cell line
Organ
3
liver
2
kidney
Project
6
AMP
Genome assembly (visualization)
1
GRCh38
Lab
5
Bing Ren, UCSD
1
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
CRISPR genome editing followed by DNA sequencing
BIOSAMPLE
ASSAY
6 results
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STARR-seq
WGBS
cell line
HepG2
2
1
HEK293T
2
Synthesized DNA
1
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