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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1578
ChIP-seq
1288
total RNA-seq
209
DNase-seq
175
ATAC-seq
100
single cell RNA-seq
18
WGBS
18
small RNA-seq
5
FAIRE-seq
1
pCHi-C
Assay category
209
DNA accessibility
18
DNA methylation
Date released
187
June, 2019
16
November, 2018
9
July, 2019
8
October, 2019
6
August, 2017
1
November, 2020
Available data
227
bam
226
bigWig
209
bed narrowPeak
209
bigBed narrowPeak
206
bed broadPeak
206
bigBed broadPeak
204
bed bed3+
41
zippedFastqFolder
29
fastq
17
bed bedMethyl
17
bigBed bedMethyl
6
tsv
Organism
227
Homo sapiens
Biosample type
194
tissue
29
primary cell
3
cell line
1
in vitro differentiated cells
Organ
79
kidney
37
limb
36
heart
34
musculature of body
32
brain
18
ureter
17
epithelium
13
vasculature
12
pancreas
11
blood vessel
11
connective tissue
6
liver
4
adipose tissue
4
artery
4
eye
3
spleen
2
nerve
2
vein
Project
227
AMP
Genome assembly (visualization)
224
GRCh38
186
hg19
Lab
227
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
227 results
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Clear Filters
DNase-seq
WGBS
tissue
heart
18
1
muscle of arm
17
brain
14
muscle of leg
13
1
kidney
13
+ See 43 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
skeletal muscle myoblast
2
+ See 18 more…
cell line
HepG2
1
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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