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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
ATAC-seq
165
ChIP-seq
111
single cell RNA-seq
87
RNA microarray
61
total RNA-seq
39
pCHi-C
26
Hi-C
21
RRBS
10
WGBS
5
GRO-seq
3
DNase-seq
3
snDrop-seq
2
Capture-C
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
10
DNA methylation
Date released
7
August, 2017
3
July, 2019
Available data
bam
17
bed bedMethyl
17
bigBed bedMethyl
17
bigWig
11
fastq
Organism
10
Homo sapiens
Biosample type
10
tissue
Organ
4
adipose tissue
4
connective tissue
4
liver
2
heart
Project
10
AMP
Lab
47
Klaus Kaestner, Upenn
10
AMP-T2D consortium
files.file_type!
bam
BIOSAMPLE
ASSAY
10 results
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WGBS
tissue
liver
3
subcutaneous abdominal adipose tissue
3
heart left ventricle
2
adipose tissue
1
right lobe of liver
1
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