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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1460
ChIP-seq
656
total RNA-seq
354
ATAC-seq
289
single cell RNA-seq
195
DNase-seq
86
RNA microarray
73
snATAC-seq
51
pCHi-C
24
Hi-C
18
RRBS
18
WGBS
13
small RNA-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
FAIRE-seq
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
18
DNA methylation
Date released
12
July, 2019
3
August, 2017
3
November, 2018
Available data
12
bam
11
bed bedMethyl
11
bigBed bedMethyl
11
bigWig
4
fastq
Organism
18
Homo sapiens
Biosample type
17
tissue
1
cell line
Organ
pancreas
47
epithelium
8
heart
6
adipose tissue
connective tissue
5
liver
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
18
AMP
Genome assembly (visualization)
11
GRCh38
Lab
18
AMP-T2D consortium
organ_slims!
connective tissue
pancreas
BIOSAMPLE
ASSAY
18 results
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WGBS
tissue
heart left ventricle
4
liver
3
aorta
2
heart right ventricle
2
spleen
2
+ See 4 more…
cell line
HepG2
1
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