Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1218
total RNA-seq
1169
ChIP-seq
406
ATAC-seq
292
single cell RNA-seq
188
DNase-seq
86
RNA microarray
84
snATAC-seq
54
pCHi-C
23
Hi-C
23
WGBS
15
small RNA-seq
14
RRBS
5
GRO-seq
4
FAIRE-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
23
DNA methylation
Date released
11
July, 2019
6
August, 2017
6
November, 2018
Available data
17
bam
16
bed bedMethyl
16
bigBed bedMethyl
16
bigWig
9
fastq
Organism
23
Homo sapiens
Biosample type
23
tissue
Organ
51
pancreas
epithelium
8
heart
6
adipose tissue
6
connective tissue
liver
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
23
AMP
Genome assembly (visualization)
16
GRCh38
Lab
23
AMP-T2D consortium
organ_slims!
epithelium
liver
BIOSAMPLE
ASSAY
23 results
search-icon
table-tab-icon
Clear Filters
WGBS
tissue
heart left ventricle
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
aorta
2
body of pancreas
2
+ See 6 more…
See all biosamples
Download