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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
31
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
1
DNA accessibility
Date released
16
May, 2021
1
February, 2021
1
October, 2019
Available data
2
bam
1
bed bed3+
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
tar
Organism
18
Homo sapiens
Biosample type
29
tissue
18
primary cell
6
cell line
5
in vitro differentiated cells
4
stem cell
Organ
2
connective tissue
1
blood vessel
1
bone element
1
bone marrow
1
epithelium
1
vasculature
1
vein
Project
16
T1D
2
AMP
Genome assembly (visualization)
2
hg19
Lab
16
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
18 results
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pCHi-C
FAIRE-seq
primary cell
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
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