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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
197
total RNA-seq
141
single cell RNA-seq
88
ChIP-seq
76
snATAC-seq
60
ATAC-seq
47
WGBS
17
pCHi-C
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Date released
17
May, 2021
2
February, 2023
Organism
19
Homo sapiens
Biosample type
16
primary cell
2
cell line
1
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
AMP
19
T1D
Lab
19
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
award.project!
AMP
BIOSAMPLE
ASSAY
19 results
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pCHi-C
HiChIP
primary cell
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
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cell line
EndoC_BH1
2
tissue
thymus
1
See all biosamples