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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
total RNA-seq
88
ChIP-seq
18
snATAC-seq
17
pCHi-C
11
ATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
105
Transcription
Date released
68
May, 2021
45
May, 2020
5
February, 2023
4
March, 2020
Available data
98
bam
98
bigWig
98
tsv
Organism
122
Homo sapiens
Biosample type
112
primary cell
8
tissue
2
cell line
Organ
9
pancreas
2
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
1376
AMP
122
T1D
92
HPAP
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
118
Kyle Gaulton, UCSD
4
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
122 results
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total RNA-seq
pCHi-C
primary cell
monocyte
53
1
B cell
2
1
CD8-positive, alpha-beta T cell
2
1
naive B cel
2
1
naive thymus-derived CD8-positive, alpha-beta T cell
2
1
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tissue
islet of Langerhans
7
thymus
1
cell line
EndoC_BH1
2
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