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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1321
total RNA-seq
205
single cell RNA-seq
31
pCHi-C
18
small RNA-seq
14
ATAC-seq
6
WGBS
3
snDrop-seq
2
RNA microarray
Date released
30
March, 2020
1
May, 2020
Available data
31
tsv
3
bedpe bed3+
bed bed3+
2
ibed
1
bam
1
fastq
Organism
31
Homo sapiens
Biosample type
20
tissue
5
cell line
4
stem cell
2
in vitro differentiated cells
Organ
3
heart
2
brain
2
connective tissue
2
intestine
2
kidney
2
liver
1
adipose tissue
1
adrenal gland
1
blood vessel
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vasculature
Project
31
AMP
Lab
31
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
31 results
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pCHi-C
tissue
Ammon's horn
1
adipose tissue
1
adrenal gland
1
aorta
1
bladder (urinary bladder)
1
+ See 15 more…
cell line
HepG2
1
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
fibroblast cell line
1
stem cell
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
embryonic stem cell
1
See all biosamples
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