Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1019
total RNA-seq
805
ChIP-seq
221
ATAC-seq
173
single cell RNA-seq
141
DNase-seq
87
RNA microarray
27
snATAC-seq
24
WGBS
23
pCHi-C
15
small RNA-seq
9
Hi-C
7
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Date released
18
March, 2020
4
October, 2019
1
May, 2021
Available data
18
tsv
Organism
23
Homo sapiens
Biosample type
23
tissue
17
primary cell
6
cell line
5
in vitro differentiated cells
4
stem cell
Organ
4
eye
3
heart
2
brain
2
intestine
2
thymus
1
adipose tissue
1
adrenal gland
1
blood vessel
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
urinary bladder
vasculature
Project
22
AMP
1
T1D
Lab
22
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
organ_slims!
vasculature
musculature of body
BIOSAMPLE
ASSAY
23 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
tissue
islet of Langerhans
4
thymus
2
Ammon's horn
1
adipose tissue
1
adrenal gland
1
bladder (urinary bladder)
1
dorsolateral prefrontal cortex
1
esophagus
1
gastric (mucosa of stomach)
1
heart left ventricle
1
heart right ventricle
1
liver
1
lung
1
ovary
1
pancreas
1
right cardiac atrium
1
sigmoid colon
1
small intestine
1
spleen
1
See all biosamples
Download