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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
474
total RNA-seq
153
ChIP-seq
25
ATAC-seq
9
DNase-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Assay category
4
Transcription
Date released
2
April, 2018
2
July, 2018
2
March, 2020
1
August, 2018
1
February, 2021
1
May, 2021
Available data
6
tsv
5
bam
4
bigWig
4
fastq
1
bed bed3+
1
bedpe bed3+
Organism
9
Homo sapiens
Biosample type
6
primary cell
1
in vitro differentiated cells
1
stem cell
1
tissue
Organ
96
heart
75
pancreas
70
epithelium
66
kidney
lung
9
connective tissue
7
blood vessel
7
vasculature
5
brain
4
eye
4
liver
2
adipose tissue
2
artery
2
intestine
2
musculature of body
2
thymus
1
adrenal gland
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
urinary bladder
Project
8
AMP
1
T1D
Genome assembly (visualization)
5
hg19
4
GRCh38
Lab
8
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
lung
BIOSAMPLE
ASSAY
9 results
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pCHi-C
single cell RNA-seq
primary cell
pancreatic stellate cell
4
adult endothelial progenitor cell
1
osteoblast
1
in vitro differentiated cells
white fat cell
1
stem cell
mesenchymal stem cell
1
tissue
adipose tissue
1
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