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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
total RNA-seq
129
ChIP-seq
103
ATAC-seq
70
single cell RNA-seq
47
WGBS
19
DNase-seq
8
Hi-C
6
MeRIP-seq
6
RRBS
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
0
siRNA RNA-seq
Assay category
47
DNA methylation
Date released
41
May, 2022
6
February, 2021
1
February, 2023
Available data
41
zippedFastqFolder
6
fastq
6
tsv
Organism
47
Homo sapiens
Biosample type
47
primary cell
1
cell line
Organ
52
pancreas
48
epithelium
8
heart
6
adipose tissue
6
connective tissue
5
liver
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
47
HPAP
1
AMP
Lab
47
Klaus Kaestner, Upenn
1
AMP-T2D consortium
BIOSAMPLE
ASSAY
48 results
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WGBS
CRISPR genome editing followed by sgRNA sequencing
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cell line
EndoC_BH1
1
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