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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1390
ChIP-seq
1278
total RNA-seq
209
DNase-seq
136
ATAC-seq
103
single cell RNA-seq
18
small RNA-seq
WGBS
5
FAIRE-seq
5
GRO-seq
5
Hi-C
Assay category
103
Transcription
Target of assay
3
control
Date released
49
April, 2018
48
July, 2018
3
August, 2018
3
July, 2019
June, 2018
Available data
208
tsv
131
fastq
103
bam
103
bigWig
52
zippedFastqFolder
13
txt
8
csv
Organism
103
Homo sapiens
Biosample type
97
primary cell
6
tissue
Organ
79
pancreas
69
epithelium
4
connective tissue
3
brain
Project
103
AMP
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
103
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
assay_title!
WGBS
month_released!
June, 2018
BIOSAMPLE
ASSAY
103 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
9
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tissue
islet of Langerhans
6
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