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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
552
ChIP-seq
189
total RNA-seq
23
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
4
3D chromatin structure
1
Transcription
Date released
1
August, 2021
1
December, 2018
1
February, 2021
1
July, 2019
1
March, 2020
Available data
2
bedpe bed3+
2
hic
1
bed bed3+
1
bigWig
1
csv
1
fastq
1
hdf5
Organism
5
Homo sapiens
Biosample type
2
cell line
2
tissue
1
primary cell
Organ
96
heart
83
pancreas
78
epithelium
65
kidney
11
blood vessel
11
vasculature
9
lung
7
musculature of body
6
brain
5
connective tissue
5
liver
4
limb
2
artery
2
vein
Project
5
AMP
Genome assembly (visualization)
3
hg19
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
BIOSAMPLE
ASSAY
5 results
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Hi-C
single cell RNA-seq
cell line
HepG2
2
tissue
liver
1
1
primary cell
endothelial cell of hepatic sinusoid
1
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