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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
857
ChIP-seq
243
total RNA-seq
128
single cell RNA-seq
61
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
128
Transcription
17
DNA methylation
Date released
48
July, 2018
38
April, 2018
22
September, 2020
18
February, 2021
8
November, 2018
4
August, 2017
3
August, 2018
3
June, 2018
1
September, 2018
Available data
211
tsv
145
fastq
118
bam
117
bigWig
93
zippedFastqFolder
17
bed bedMethyl
17
bigBed bedMethyl
13
txt
8
csv
Organism
145
Homo sapiens
Biosample type
134
primary cell
10
tissue
1
cell line
Organ
79
pancreas
72
epithelium
6
connective tissue
3
adipose tissue
2
liver
2
spleen
Project
105
AMP
40
HPAP
Genome assembly (visualization)
101
GRCh38
92
hg19
Lab
105
AMP-T2D consortium
40
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
145 results
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single cell RNA-seq
WGBS
primary cell
Langerhans cell
34
pancreatic alpha cell
12
6
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic acinar cell
9
+ See 12 more…
tissue
adipose tissue
3
body of pancreas
2
pancreas
2
spleen
2
liver
1
cell line
HepG2
1
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