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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
867
ChIP-seq
260
ATAC-seq
178
DNase-seq
174
single cell RNA-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
174
Transcription
27
DNA methylation
Date released
106
August, 2021
47
September, 2023
12
July, 2019
9
April, 2020
9
August, 2017
6
February, 2021
6
November, 2018
3
May, 2023
1
December, 2019
1
February, 2023
1
May, 2022
Available data
103
tsv
17
bam
16
bed bedMethyl
16
bigBed bedMethyl
16
bigWig
13
txt
10
fastq
6
csv
Organism
201
Homo sapiens
Biosample type
234
primary cell
201
tissue
2
in vitro differentiated cells
1
cell line
Organ
101
heart
64
kidney
9
lung
8
blood vessel
8
vasculature
6
adipose tissue
6
connective tissue
5
liver
4
pancreas
2
artery
2
musculature of body
2
spleen
1
limb
Project
145
AMP
47
KPMP
9
LungMap
Genome assembly (visualization)
16
GRCh38
Lab
134
AMP-T2D consortium
47
KPMP
11
Katalin Susztak, Upenn
9
Xin Sun, UCSD
Audit category:
5
audit script error
BIOSAMPLE
ASSAY
201 results
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single cell RNA-seq
WGBS
tissue
kidney
64
heart left ventricle
18
4
heart right ventricle
17
2
right cardiac atrium
18
1
left cardiac atrium
18
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