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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
1278
total RNA-seq
209
DNase-seq
175
ATAC-seq
158
single cell RNA-seq
58
WGBS
21
snATAC-seq
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
5
Hi-C
Assay category
158
Transcription
Target of assay
3
control
Date released
49
April, 2018
48
July, 2018
33
May, 2022
19
September, 2020
3
August, 2018
3
July, 2019
3
June, 2018
Available data
211
tsv
134
fastq
106
bam
106
bigWig
52
zippedFastqFolder
13
txt
8
csv
Organism
158
Homo sapiens
Biosample type
152
primary cell
6
tissue
Organ
80
pancreas
70
epithelium
4
connective tissue
3
brain
Project
106
AMP
52
HPAP
Genome assembly (visualization)
106
GRCh38
106
hg19
Lab
106
AMP-T2D consortium
52
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
158 results
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single cell RNA-seq
primary cell
Langerhans cell
52
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
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tissue
islet of Langerhans
6
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