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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
194
total RNA-seq
154
single cell RNA-seq
76
ATAC-seq
43
ChIP-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
154
Transcription
Date released
106
August, 2021
48
July, 2018
47
September, 2023
43
April, 2018
40
September, 2020
34
May, 2022
18
February, 2021
9
April, 2020
3
August, 2018
3
December, 2019
3
July, 2019
3
June, 2018
3
May, 2023
1
February, 2023
1
November, 2018
1
September, 2018
Available data
146
tsv
48
bam
48
bigWig
48
fastq
8
txt
Organism
154
Homo sapiens
Biosample type
106
tissue
48
primary cell
Organ
92
heart
37
pancreas
33
epithelium
8
kidney
6
blood vessel
6
vasculature
2
artery
2
connective tissue
Project
154
AMP
Genome assembly (visualization)
48
GRCh38
48
hg19
Lab
146
AMP-T2D consortium
8
Katalin Susztak, Upenn
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
154 results
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single cell RNA-seq
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
kidney
8
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primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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