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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
single cell RNA-seq
76
ATAC-seq
74
total RNA-seq
43
ChIP-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
109
Transcription
Date released
106
August, 2021
48
July, 2018
47
September, 2023
43
April, 2018
40
September, 2020
34
May, 2022
18
February, 2021
9
April, 2020
3
August, 2018
3
December, 2019
3
July, 2019
3
June, 2018
3
May, 2023
1
February, 2023
1
November, 2018
1
September, 2018
Available data
101
tsv
8
txt
3
bam
3
bigWig
3
fastq
Organism
109
Homo sapiens
Biosample type
106
tissue
3
primary cell
Organ
92
heart
8
kidney
6
blood vessel
6
vasculature
2
artery
1
epithelium
1
pancreas
Project
109
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
101
AMP-T2D consortium
8
Katalin Susztak, Upenn
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
109 results
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single cell RNA-seq
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
kidney
8
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primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
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