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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
61
total RNA-seq
46
ATAC-seq
11
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
Assay category
102
DNA binding
6
Transcription
Target of assay
71
histone
71
histone modification
45
broad histone mark
26
narrow histone mark
22
control
9
transcription factor
5
RNA binding protein
Date released
50
May, 2019
40
October, 2019
6
August, 2021
6
February, 2021
6
November, 2017
Available data
102
bam
79
bigWig
75
bed narrowPeak
71
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
6
fastq
6
tagAlign
6
tsv
Organism
108
Homo sapiens
Biosample type
79
tissue
23
primary cell
6
cell line
Organ
553
liver
292
pancreas
221
brain
199
epithelium
187
heart
157
connective tissue
116
kidney
108
vasculature
105
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
40
musculature of body
36
artery
35
nerve
22
embryo
20
spleen
17
vein
9
lung
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
108
AMP
Genome assembly (visualization)
79
hg19
75
GRCh38
Lab
108
AMP-T2D consortium
BIOSAMPLE
ASSAY
108 results
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ChIP-seq
single cell RNA-seq
tissue
tibial artery
23
aorta
13
4
ascending aorta
16
thoracic aorta
16
coronary artery
5
+ See 1 more…
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
cell line
smooth muscle cell of the coronary artery
6
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