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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1414
total RNA-seq
1387
ChIP-seq
ATAC-seq
369
single cell RNA-seq
210
DNase-seq
87
RNA microarray
84
snATAC-seq
74
WGBS
51
pCHi-C
30
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
4
MeRIP-seq
3
snDrop-seq
2
Capture-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
Assay category
210
DNA accessibility
18
Transcription
Date released
187
June, 2019
18
July, 2019
9
November, 2018
8
October, 2019
5
August, 2017
1
November, 2020
Available data
225
bam
225
bigWig
207
bed narrowPeak
207
bigBed narrowPeak
205
bed broadPeak
205
bigBed broadPeak
203
bed bed3+
18
tsv
12
fastq
Organism
228
Homo sapiens
Biosample type
194
tissue
33
primary cell
cell line
1
in vitro differentiated cells
Organ
81
kidney
36
brain
36
limb
35
musculature of body
31
heart
18
epithelium
18
ureter
12
connective tissue
11
vasculature
9
blood vessel
9
liver
9
pancreas
5
adipose tissue
4
artery
4
eye
2
nerve
2
vein
1
spleen
Project
228
AMP
Genome assembly (visualization)
223
GRCh38
202
hg19
Lab
228
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
ATAC-seq
biosample_type!
cell line
BIOSAMPLE
ASSAY
228 results
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Clear Filters
DNase-seq
small RNA-seq
tissue
heart
18
1
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 46 more…
primary cell
cardiac fibroblast
3
kidney tubule cell
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
+ See 20 more…
in vitro differentiated cells
adipocyte
1
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