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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1305
ChIP-seq
1285
total RNA-seq
261
ATAC-seq
186
DNase-seq
100
single cell RNA-seq
27
Hi-C
19
RRBS
18
small RNA-seq
5
FAIRE-seq
4
pCHi-C
2
Capture-C
1
snATAC-seq
Assay category
186
DNA accessibility
18
Transcription
Date released
164
June, 2019
18
July, 2019
9
November, 2018
8
October, 2019
4
August, 2017
1
November, 2020
Available data
204
bam
204
bigWig
186
bed narrowPeak
186
bigBed narrowPeak
183
bed broadPeak
183
bigBed broadPeak
181
bed bed3+
18
tsv
12
fastq
Organism
204
Homo sapiens
Biosample type
177
tissue
24
primary cell
2
cell line
1
in vitro differentiated cells
Organ
73
kidney
36
limb
35
musculature of body
28
heart
26
brain
18
ureter
11
connective tissue
11
epithelium
10
vasculature
8
blood vessel
8
liver
8
pancreas
5
adipose tissue
4
artery
4
eye
2
nerve
2
vein
1
spleen
Project
204
AMP
Genome assembly (visualization)
225
GRCh38
204
hg19
Lab
204
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
204 results
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DNase-seq
small RNA-seq
tissue
heart
16
1
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 35 more…
primary cell
cardiac fibroblast
2
endothelial cell of umbilical vein
2
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 16 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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