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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
474
total RNA-seq
153
ChIP-seq
25
ATAC-seq
9
DNase-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Assay category
9
DNA accessibility
3
Transcription
Date released
6
June, 2019
3
July, 2019
1
August, 2017
1
November, 2018
1
November, 2020
Available data
12
bam
12
bigWig
9
bed broadPeak
9
bed narrowPeak
9
bigBed broadPeak
9
bigBed narrowPeak
8
bed bed3+
3
tsv
2
fastq
Organism
12
Homo sapiens
Biosample type
7
primary cell
4
tissue
1
in vitro differentiated cells
Organ
82
kidney
36
brain
36
limb
35
musculature of body
31
heart
19
epithelium
18
ureter
12
connective tissue
11
vasculature
10
pancreas
9
blood vessel
9
liver
5
adipose tissue
4
artery
4
eye
2
nerve
2
vein
1
spleen
Project
12
AMP
Genome assembly (visualization)
12
GRCh38
11
hg19
Lab
12
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
12 results
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DNase-seq
small RNA-seq
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
mesenchymal stem cell of adipose
1
osteoblast
1
tissue
omental fat pad
2
1
subcutaneous adipose tissue
1
in vitro differentiated cells
adipocyte
1
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