Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1321
total RNA-seq
205
single cell RNA-seq
31
pCHi-C
18
small RNA-seq
14
ATAC-seq
6
WGBS
3
snDrop-seq
2
RNA microarray
Assay category
18
Transcription
Date released
30
March, 2020
18
July, 2019
1
May, 2020
Available data
49
tsv
19
bam
18
bigWig
3
bedpe bed3+
2
bed bed3+
2
ibed
1
fastq
Organism
49
Homo sapiens
Biosample type
36
tissue
5
cell line
4
stem cell
2
in vitro differentiated cells
2
primary cell
Organ
6
brain
5
connective tissue
5
liver
4
adipose tissue
4
heart
3
kidney
3
musculature of body
3
pancreas
2
intestine
1
adrenal gland
1
blood vessel
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vasculature
Project
49
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
49
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
49 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
small RNA-seq
tissue
body of pancreas
2
liver
1
1
right lobe of liver
2
Ammon's horn
1
adipose tissue
1
+ See 28 more…
cell line
HepG2
1
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
fibroblast cell line
1
stem cell
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
embryonic stem cell
1
primary cell
mesenchymal stem cell of adipose
1
skeletal muscle satellite cell
1
See all biosamples
Download