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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
907
ChIP-seq
260
ATAC-seq
178
DNase-seq
174
single cell RNA-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
28
DNA accessibility
16
Transcription
Date released
16
July, 2019
10
April, 2020
8
January, 2021
6
August, 2021
2
February, 2023
1
August, 2022
1
May, 2022
Available data
16
bam
16
bigWig
16
tsv
1
bed bed3+
1
txt
Organism
43
Homo sapiens
Biosample type
58
primary cell
44
tissue
Organ
13
pancreas
10
lung
7
kidney
4
brain
3
liver
2
adipose tissue
2
connective tissue
2
musculature of body
1
heart
Project
24
AMP
10
LungMap
10
T1D
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
18
AMP-T2D consortium
10
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
Katalin Susztak, Upenn
Audit category:
2
audit script error
BIOSAMPLE
ASSAY
44 results
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snATAC-seq
small RNA-seq
tissue
lung
10
islet of Langerhans
7
kidney
6
pancreas
4
body of pancreas
2
right lobe of liver
2
skeletal muscle tissue
1
1
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
heart
1
liver
1
metanephros
1
occipital lobe
1
omental fat pad
1
parietal lobe
1
subcutaneous adipose tissue
1
temporal lobe
1
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