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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1327
total RNA-seq
1101
ChIP-seq
504
ATAC-seq
359
single cell RNA-seq
174
DNase-seq
87
RNA microarray
84
snATAC-seq
70
WGBS
52
pCHi-C
27
Hi-C
17
RRBS
11
small RNA-seq
10
MeRIP-seq
5
GRO-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
11
Transcription
Date released
11
July, 2019
3
February, 2021
Available data
14
tsv
11
bam
11
bigWig
Organism
14
Homo sapiens
Biosample type
12
tissue
2
primary cell
Organ
brain
4
kidney
3
adipose tissue
3
connective tissue
liver
2
musculature of body
2
pancreas
1
heart
Project
14
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
14
AMP-T2D consortium
organ_slims!
brain
liver
BIOSAMPLE
ASSAY
14 results
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small RNA-seq
snDrop-seq
tissue
body of pancreas
2
heart
1
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
+ See 6 more…
primary cell
mesenchymal stem cell of adipose
1
skeletal muscle satellite cell
1
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