Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1614
ChIP-seq
1510
total RNA-seq
526
ATAC-seq
359
single cell RNA-seq
147
DNase-seq
87
RNA microarray
83
snATAC-seq
74
WGBS
54
pCHi-C
25
Hi-C
14
RRBS
12
small RNA-seq
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
12
Transcription
Date released
84
February, 2021
12
July, 2019
2
December, 2019
1
August, 2021
Available data
84
txt
14
tsv
12
bam
12
bigWig
Organism
98
Homo sapiens
Biosample type
98
tissue
1
primary cell
Organ
84
bone element
4
adipose tissue
brain
4
connective tissue
3
kidney
3
liver
musculature of body
2
pancreas
1
epithelium
1
heart
Project
99
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
99
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
2
audit script error
organ_slims!
brain
musculature of body
BIOSAMPLE
ASSAY
99 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
small RNA-seq
tissue
bone element
84
body of pancreas
2
right lobe of liver
2
subcutaneous adipose tissue
1
1
heart
1
+ See 7 more…
primary cell
mesenchymal stem cell of adipose
1
See all biosamples
Download