Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1678
ChIP-seq
1059
total RNA-seq
506
ATAC-seq
359
single cell RNA-seq
203
DNase-seq
86
RNA microarray
84
snATAC-seq
69
WGBS
52
pCHi-C
33
Hi-C
20
RRBS
15
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
15
Transcription
Date released
15
July, 2019
2
February, 2023
Available data
15
bam
15
bigWig
15
tsv
Organism
17
Homo sapiens
Biosample type
14
tissue
2
cell line
1
primary cell
Organ
4
brain
3
adipose tissue
connective tissue
3
liver
2
musculature of body
2
pancreas
1
heart
1
kidney
Project
15
AMP
2
T1D
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
15
AMP-T2D consortium
2
Kyle Gaulton, UCSD
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
small RNA-seq
HiChIP
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
+ See 7 more…
cell line
EndoC_BH1
2
primary cell
skeletal muscle satellite cell
1
See all biosamples
Download