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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1659
ChIP-seq
1247
total RNA-seq
343
ATAC-seq
212
DNase-seq
211
single cell RNA-seq
87
RNA microarray
40
pCHi-C
28
WGBS
26
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
3
snDrop-seq
2
Capture-C
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
2
DNA accessibility
Date released
3
February, 2021
1
August, 2022
1
May, 2022
Available data
3
tsv
1
bed bed3+
1
txt
Organism
5
Homo sapiens
Biosample type
5
tissue
Organ
3
kidney
1
musculature of body
1
pancreas
Project
5
AMP
Genome assembly (visualization)
1
hg19
Lab
48
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
Katalin Susztak, Upenn
5
AMP-T2D consortium
Audit category:
2
audit script error
BIOSAMPLE
ASSAY
5 results
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snDrop-seq
snATAC-seq
tissue
islet of Langerhans
1
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
skeletal muscle tissue
1
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