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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
857
ChIP-seq
243
total RNA-seq
128
single cell RNA-seq
61
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
243
Transcription
27
DNA accessibility
Date released
89
August, 2017
76
February, 2023
27
February, 2021
26
September, 2018
16
September, 2020
15
February, 2018
6
April, 2018
6
May, 2022
5
January, 2019
2
July, 2018
2
October, 2018
Available data
1321
tsv
1288
bam
1284
bigWig
270
fastq
60
txt
21
zippedFastqFolder
3
bed bed3+
Organism
270
Homo sapiens
Biosample type
147
primary cell
103
tissue
15
in vitro differentiated cells
5
cell line
Organ
184
pancreas
81
epithelium
5
liver
4
embryo
Project
151
AMP
119
HPAP
Genome assembly (visualization)
145
GRCh38
145
hg19
Lab
145
AMP-T2D consortium
119
Klaus Kaestner, Upenn
6
Kyle Gaulton, UCSD
Audit category:
27
audit script error
BIOSAMPLE
ASSAY
270 results
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Clear Filters
total RNA-seq
snATAC-seq
primary cell
pancreatic alpha cell
52
exocrine cell
39
Langerhans cell
27
pancreatic beta cell
21
pancreatic acinar cell
4
+ See 1 more…
tissue
islet of Langerhans
103
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
cell line
HepG2
5
See all biosamples
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