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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1305
ChIP-seq
1285
total RNA-seq
261
ATAC-seq
186
DNase-seq
100
single cell RNA-seq
27
Hi-C
19
RRBS
18
small RNA-seq
5
FAIRE-seq
4
pCHi-C
2
Capture-C
1
snATAC-seq
Assay category
187
DNA accessibility
Date released
164
June, 2019
9
November, 2018
8
October, 2019
4
August, 2017
1
May, 2022
1
November, 2020
Available data
186
bam
186
bed narrowPeak
186
bigBed narrowPeak
186
bigWig
183
bed broadPeak
183
bigBed broadPeak
182
bed bed3+
12
fastq
1
txt
Organism
187
Homo sapiens
Biosample type
162
tissue
22
primary cell
2
cell line
1
in vitro differentiated cells
Organ
72
kidney
36
limb
34
musculature of body
27
heart
22
brain
18
ureter
11
epithelium
10
vasculature
8
blood vessel
8
connective tissue
6
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
187
AMP
Genome assembly (visualization)
207
GRCh38
187
hg19
Lab
187
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
1
audit script error
BIOSAMPLE
ASSAY
187 results
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DNase-seq
snATAC-seq
tissue
muscle of arm
17
heart
16
brain
14
kidney
13
muscle of leg
13
+ See 30 more…
primary cell
cardiac fibroblast
2
endothelial cell of umbilical vein
2
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 14 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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