Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 893total RNA-seq
  • 510ChIP-seq
  • 129DNase-seq
  • 121ATAC-seq
  • 15small RNA-seq
  • 9Hi-C
  • 7RRBS
  • 6single cell RNA-seq
  • FAIRE-seq
  • 0snATAC-seq
Assay category
  • 893Transcription
Date released
  • 444February, 2021
  • 143May, 2020
  • 116July, 2018
  • 89August, 2017
  • 38May, 2021
  • 30July, 2019
  • 19November, 2019
  • 8October, 2019
  • 5March, 2020
  • 1May, 2023
Available data
  • 892bam
  • 892bigWig
  • 892tsv
  • 91fastq
Organism
  • 893Homo sapiens
Biosample type
  • 893tissue
  • 151primary cell
  • 127in vitro differentiated cells
  • 104cell line
Organ
  • 453connective tissue
  • 395adipose tissue
  • 263pancreas
  • 149liver
  • 58bone element
  • 12heart
  • 5brain
  • 4blood vessel
  • 4limb
  • musculature of body
  • 4nerve
  • 4vasculature
  • 1kidney
Project
  • 893AMP
Genome assembly (visualization)
  • 893GRCh38
  • 893hg19
Lab
  • 893AMP-T2D consortium
organ_slims!
  • musculature of body
assay_title!
  • FAIRE-seq
BIOSAMPLE
ASSAY

893 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
tissue
adipose tissue382
islet of Langerhans260
liver147
bone tissue58
subcutaneous adipose tissue6
heart4
omental fat pad4
tibial nerve4
heart left ventricle3
visceral abdominal adipose tissue3
body of pancreas2
right atrium auricular region2
right lobe of liver2
thoracic aorta2
aorta1
ascending aorta1
brain1
cardiac atrium1
cardiac ventricle1
cerebellum1
diencephalon1
frontal cortex1
heart right ventricle1
metanephros1
occipital lobe1
pancreas1
parietal lobe1
temporal lobe1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego