Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
total RNA-seq
88
ChIP-seq
18
snATAC-seq
17
pCHi-C
11
ATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
105
Transcription
18
DNA accessibility
Date released
51
May, 2021
45
May, 2020
16
January, 2021
7
February, 2023
4
March, 2020
Available data
98
bam
98
bigWig
98
tsv
Organism
123
Homo sapiens
Biosample type
104
primary cell
17
tissue
2
cell line
Organ
19
pancreas
8
blood
8
bodily fluid
2
epithelium
Project
1344
AMP
140
HPAP
123
T1D
10
LungMap
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
119
Kyle Gaulton, UCSD
4
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
123 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
snATAC-seq
primary cell
monocyte
53
peripheral blood mononuclear cell
8
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
+ See 21 more…
tissue
islet of Langerhans
7
6
pancreas
4
cell line
EndoC_BH1
2
See all biosamples
Download