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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1659
ChIP-seq
1241
total RNA-seq
343
ATAC-seq
217
single cell RNA-seq
212
DNase-seq
87
RNA microarray
40
pCHi-C
28
WGBS
26
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
3
snDrop-seq
2
Capture-C
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
2
DNA accessibility
Date released
2
August, 2021
1
August, 2022
1
May, 2022
Available data
1
bed bed3+
1
txt
Organism
4
Homo sapiens
Biosample type
2
cell line
2
tissue
Organ
3
pancreas
2
epithelium
1
musculature of body
Project
LungMap
4
AMP
Genome assembly (visualization)
1
hg19
Lab
48
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
6
Katalin Susztak, Upenn
4
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
0
Xin Sun, UCSD
Audit category:
2
audit script error
2
inconsistent ontology term
award.project!
LungMap
BIOSAMPLE
ASSAY
4 results
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Capture-C
snATAC-seq
cell line
EndoC_BH1
2
tissue
islet of Langerhans
1
skeletal muscle tissue
1
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