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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1863
ChIP-seq
962
total RNA-seq
432
ATAC-seq
311
single cell RNA-seq
212
DNase-seq
55
pCHi-C
35
snATAC-seq
34
Hi-C
28
WGBS
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
35
DNA accessibility
Date released
February, 2021
May, 2022
16
January, 2021
10
April, 2020
6
August, 2021
2
February, 2023
1
August, 2022
Organism
34
Homo sapiens
Biosample type
27
tissue
8
primary cell
Organ
11
pancreas
10
lung
8
blood
8
bodily fluid
6
kidney
Project
18
T1D
10
LungMap
7
AMP
Lab
18
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
Katalin Susztak, Upenn
1
AMP-T2D consortium
Audit category:
1
audit script error
month_released!
May, 2022
February, 2021
BIOSAMPLE
ASSAY
35 results
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snATAC-seq
tissue
lung
10
islet of Langerhans
7
kidney
6
pancreas
4
primary cell
peripheral blood mononuclear cell
8