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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
ChIP-seq
151
ATAC-seq
102
single cell RNA-seq
59
total RNA-seq
31
DNase-seq
10
RRBS
6
Hi-C
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
1
pCHi-C
Assay category
59
Transcription
Date released
26
September, 2018
13
July, 2019
5
December, 2019
4
May, 2021
4
November, 2020
2
May, 2020
2
October, 2018
2
October, 2019
1
February, 2021
Available data
56
bigWig
54
bam
54
tsv
28
fastq
2
bed bed3+
Organism
59
Homo sapiens
Biosample type
1030
tissue
136
in vitro differentiated cells
111
cell line
59
primary cell
Organ
40
epithelium
28
pancreas
10
connective tissue
6
kidney
5
liver
4
heart
2
artery
2
blood vessel
2
vasculature
1
adipose tissue
1
musculature of body
1
pericardium
Project
96
T1D
92
HPAP
59
AMP
Genome assembly (visualization)
56
hg19
54
GRCh38
Lab
57
AMP-T2D consortium
2
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
59 results
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total RNA-seq
primary cell
pancreatic alpha cell
10
pancreatic beta cell
10
hepatocyte
5
osteoblast
5
pancreatic acinar cell
4
pancreatic ductal cell
4
CD8-positive, alpha-beta T cell
2
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
embryonic stem cell
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
mesangial cell
1
mesenchymal stem cell of adipose
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
1
pericardium fibroblast
1
renal cortical epithelial cell
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
smooth muscle cell of the coronary artery
1
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