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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
99
total RNA-seq
28
ATAC-seq
6
MeRIP-seq
4
pCHi-C
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
2
Capture-C
2
DNase-seq
2
Hi-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
99
Transcription
Date released
78
February, 2021
8
August, 2021
4
March, 2020
4
May, 2021
4
October, 2019
1
November, 2019
Available data
99
bam
99
bigWig
99
tsv
Organism
99
Homo sapiens
Biosample type
867
tissue
242
primary cell
136
in vitro differentiated cells
99
cell line
Organ
52
artery
52
blood vessel
52
heart
52
vasculature
34
epithelium
33
pancreas
liver
8
embryo
4
kidney
Project
97
AMP
2
T1D
Genome assembly (visualization)
99
GRCh38
99
hg19
Lab
99
AMP-T2D consortium
Audit category:
36
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
99 results
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total RNA-seq
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
33
H1-hESC
8
early embryonic cell
2
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
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