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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
183
ChIP-seq
136
total RNA-seq
42
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
1
DNase-seq
Assay category
136
Transcription
Date released
84
May, 2021
22
February, 2021
15
February, 2018
7
August, 2021
4
February, 2023
2
March, 2020
2
October, 2019
Available data
127
bam
127
bigWig
127
tsv
15
fastq
Organism
136
Homo sapiens
Biosample type
861
tissue
242
primary cell
136
in vitro differentiated cells
99
cell line
Organ
9
connective tissue
6
embryo
2
epithelium
1
heart
Project
136
AMP
Genome assembly (visualization)
127
GRCh38
127
hg19
Lab
131
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
89
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
136 results
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total RNA-seq
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
induced pluripotent stem cell
9
embryonic stem cell
7
neural progenitor cell
7
adipocyte
5
pancreatic endoderm
4
cardiomyocytes (cardiac muscle cell)
3
definitive endodermal cell
2
endocrine cell
2
immature adipocyte
2
posterior foregut
2
primitive gut cell
2
cardiac fibroblast
1
endothelial cell
1
hematopoietic multipotent progenitor cell
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
islet precursor cell
1
lymphocyte of B lineage (iPSC)
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
preadipocyte
1
smooth muscle cell
1
stem cell
1
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